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Wednesday, October 10, 2012

Install xcrysden simplest way for all UBUNTU

XCrySDen is a crystalline and molecular structure visualisation program, which aims at display of isosurfaces and contours, which can be superimposed on crystalline structures and interactively rotated and manipulated. It can run on most UNIX platforms, without any special hardware requirements.
Here is the simplest  installation procedure for xcrysden  installation.

The general method for Ubuntu has been given in this post.

Here is the simplest method of all.




Download it and keep it on  Desktop...



Now open a terminal and type in the following...

The following applies for both 32-bit and 64-bit users...

cd ~/Desktop

tar -xzvf xcrysden_*_debian_and_ubuntu.tar.gz
cd  xcrysden_*_debian_and_ubuntu
chmod +x ./install.sh
./install.sh

After finishing installation you can verify installation by typing in

xcrysden


Cheers,
SANJEEV

27 comments:

  1. when i run the xcrysden it says,

    ......XCrySDen-1.5.24-src-all/bin/xcrys: not found

    then what can i do

    ReplyDelete
  2. Thanks!!! After trying all kinds of stuff, this finally worked.

    ReplyDelete
  3. 0 upgraded, 0 newly installed, 0 to remove and 109 not upgraded.


    above error was found during installation of Xcrysden.

    PLZ help me.

    ReplyDelete
  4. That has nothing to do with Xcrysden...

    I hope it will be working fine...

    To rectify that message, one can do the following...


    In the terminal, type in...


    sudo apt-get update

    sudo apt-get dist-upgrade


    Hope this will help you...

    With regards,
    SANJEEV

    ReplyDelete
  5. after installing it says xcrysden command not found

    ReplyDelete
  6. after installation i am having this problem
    Fetched 1,973 kB in 7s (270 kB/s)
    E: Could not get lock /var/lib/dpkg/lock - open (11: Resource temporarily unavailable)
    E: Unable to lock the administration directory (/var/lib/dpkg/), is another process using it?
    what to do now??

    ReplyDelete
  7. thanks it worked perfectly! I extracted in the home folder and the first errors dissapeared.

    ReplyDelete
  8. I'm using 12.04.2 for 32 bit. a compile error saying "Errors were encountered while processing:
    *.i386.deb" occurs and there's no xcrysden executable after the installation.

    how to correct this

    ReplyDelete
  9. please edit the "install.sh" file using any text editor like gedit, nano, vi etc...

    please change "*.i386.deb" to "*i386.deb"

    ie; remove the 'dot' after *

    save it and proceed with the regular instructions...

    I am sorry for this inconvenience...

    ReplyDelete
  10. It worked for me. Thank you

    ReplyDelete
  11. thankx sanjeev.. just solve any 'lock' problem with sudo rm and installation will be easy...

    ReplyDelete
  12. during compilation of xcrysden faced below error

    In file included from ../common/utils.h:32,
    from ../common/utils.c:37:
    ../../../../../include/GL/internal/dri_interface.h:51:17: error: drm.h: No such file or directory
    In file included from ../common/utils.h:32,
    from ../common/utils.c:37:
    ../../../../../include/GL/internal/dri_interface.h:317: error: expected declaration specifiers or â...â before âdrm_clip_rect_tâ
    ../../../../../include/GL/internal/dri_interface.h:319: error: expected declaration specifiers or â...â before âdrm_clip_rect_tâ
    ../../../../../include/GL/internal/dri_interface.h:373: error: expected declaration specifiers or â...â before âdrm_clip_rect_tâ
    ../../../../../include/GL/internal/dri_interface.h:632: error: expected declaration specifiers or â...â before âdrm_drawable_tâ
    ../../../../../include/GL/internal/dri_interface.h:640: error: expected declaration specifiers or â...â before âdrm_context_tâ
    gmake[8]: *** [../common/utils.o] Error 1

    Please help and after make all with error I fired ./xcrysden and faced below error


    XCRYSDEN_TOPDIR=/home1/sktripathy/xcrysden-1.5.60-bin-shared
    XCRYSDEN_SCRATCH=/home1/sktripathy/xcrys_tmp

    /home1/sktripathy/xcrysden-1.5.60-bin-shared/bin/xcrys: /lib64/libm.so.6: version `GLIBC_2.15' not found (required by /home1/sktripathy/xcrysden-1.5.60-bin-shared/bin/xcrys)
    /home1/sktripathy/xcrysden-1.5.60-bin-shared/bin/xcrys: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /home1/sktripathy/xcrysden-1.5.60-bin-shared/bin/xcrys)

    ReplyDelete
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